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Drawing Chemical Structures

November 10, 2024 | by Bloom Code Studio

Let’s cover just one more point before ending this introductory chapter. In the structures we’ve been drawing until now, a line between atoms has represented the two electrons in a covalent bond. Drawing every bond and every atom is tedious, however, so chemists have devised several shorthand ways for writing structures. In condensed structures, carbon–hydrogen and carbon–carbon single bonds aren’t shown; instead, they’re understood. If a carbon has three hydrogens bonded to it, we write CH3; if a carbon has two hydrogens bonded to it, we write CH2; and so on. The compound called 2-methylbutane, for example, is written as follows:

The conversion of chemical structure of 2-methylbutane to two different condensed structures.

Note that the horizontal bonds between carbons aren’t shown in condensed structures—the CH3, CH2, and CH units are simply placed next to each other—but vertical carbon–carbon bonds like that of the first of the condensed structures drawn above is shown for clarity. Notice also in the second of the condensed structures that the two CH3 units attached to the CH carbon are grouped together as (CH3)2.

Even simpler than condensed structures are skeletal structures such as those shown in Table 1.3. The rules for drawing skeletal structures are straightforward.

RULE 1
Carbon atoms aren’t usually shown. Instead, a carbon atom is assumed to be at each intersection of two lines (bonds) and at the end of each line. Occasionally, a carbon atom might be indicated for emphasis or clarity.

RULE 2
Hydrogen atoms bonded to carbon aren’t shown. Because carbon always has a valence of 4, we mentally supply the correct number of hydrogen atoms for each carbon.

RULE 3
Atoms other than carbon and hydrogen are shown.

One further comment: Although such groupings as –CH3, –OH, and –NH2 are usually written with the C, O, or N atom first and the H atom second, the order of writing is sometimes inverted to H3C–, HO–, and H2N– if needed to make the bonding connections clearer. Larger units such as –CH2CH3 are not inverted, though; we don’t write H3CH2C– because it would be confusing. There are, however, no well-defined rules that cover all cases; it’s largely a matter of preference.

Table 1.3 Line-bond and Skeletal Structures for Some Compounds

CompoundLine-bond structureSkeletal structure
Isoprene, C5H8The line-bond structure of isoprene.The skeletal structure of isoprene.
Methylcyclohexane, C7H14The line-bond structure of methylcyclohexane.The skeletal structure of methylcyclohexane.
Phenol, C6H6OThe line-bond structure of phenol.The skeletal structure of phenol.

Worked Example 1.4

Interpreting a Line-Bond Structure

Carvone, a substance responsible for the odor of spearmint, has the following structure. Tell how many hydrogens are bonded to each carbon, and give the molecular formula of carvone.

The skeletal structure of carvone.

Strategy

The end of a line represents a carbon atom with 3 hydrogens, CH3; a two-way intersection is a carbon atom with 2 hydrogens, CH2; a three-way intersection is a carbon atom with 1 hydrogen, CH; and a four-way intersection is a carbon atom with no attached hydrogens.

Solution

The skeletal structure of carvone. Numbers (0 H, 1 H, 2 H, and 3 H) are used to represent the number of hydrogens on each carbon.

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